rs32116511 SNP Detail

Summary

• ID
  rs32116511
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117694966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGC AGCAGTGTCA GGAGGCTCAC
  W
  ATTGCTTGTA ACTTCAGCTT CAGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45608877	mCV24296817	ABI	CRAMUS_MOUSE	f	SNP		A	T	A
ss147294766	ENSMUSSNP3327816	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss321280579	CHEV_4_117510374	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32116511					SNP	T	A	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117694966 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14668	CpG island 14668	1014 bp distal
Gm17114	predicted gene 17114	within coordinates
Slc6a9	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	within coordinates
Tssr42994	transcription start site region 42994	1922 bp upstream