rs32118905 SNP Detail

Summary

• ID
  rs32118905
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109836048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAGTGG ACTTTAAAAT
  GATCGTCACT ATTAAAATAT TAAGAGTTGC TGGGTAGTGG TGGCGCATGC CTTTAATCCC
  AGCACCAAAA AAACAAAAAA AAAAAAAAGA GTTTTACTAT TAAGAACTCA TTCGGCTGTT
  ATTGAAAGCA TTGTAGATAT TGGTCAGCAT GTACTGTGGG TATGTAGTGA GGGTGAGATA
  Y
  TGGCACTGTT CTCAGAATGT CTGTCTGATC TTGTGTGAGA AAAGCTTATG AAACTGTGTA
  GTGCAAGAGT TATAGATGGC TTGGGCTACC CAGCTTGAGA AGAGACTTTG GGCATTTAGG
  AAGAGCTAGT TCTCAGGTAG AAATGGAGGT GAGTGGACCT CACTCAGGAA AGGGGAGCTG
  CAGGGTTTGC CTGAGATCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47128336	NES11591210	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32118905					SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47128336	NES11591210	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109836048 () rs orientation: forward

Symbol	Name	Function Class
Swap70	SWA-70 protein	within coordinates
Tssr68496	transcription start site region 68496	898 bp upstream
Tssr68497	transcription start site region 68497	1037 bp upstream