rs32119673 SNP Detail

Summary

• ID
  rs32119673
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109837531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTCTAAT AGGAACAGCT
  CATGGCAATC CTTTTACAAA TTAGGGACTT GTAGTCTTTT TTGCTTCTGA TTGCTTTTGT
  TTGATCTGTT TTTGTGCTTT TCCTTGTGGA GAAAGGGCTA ATGCCTCTGG GCGTGGTTTC
  CTCACAGGCC TGTGCTGGTA GGAGGAGGTT TCCACACAGG GAATGGTTCT GGGCTTGCAG
  K
  AGTTCTTCAC CACAGGGTTA GTCCCAGTCA TCTTGCTGGG TCACTACCCA CCCCTGCAGC
  CTAGGCACAG CATGCACACA TGTCTTTGGA GTTACCATTT CATAGGCAAG GCAGTCTGCC
  AGCAGAGAGG AGGAGGCATA CCAAGGAAAG AATCCAGAGT GAGCAGTTTG GGTTCTAATC
  CCAGTTCCTG ACATGCAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47128354	NES11591225	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	T		T	T	G	T		T
ss322395322	CHEV_7_117381838	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32119673					SNP	G	G	G	G	G	G	T	G	G	T	G	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47128354	NES11591225	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109837531 () rs orientation: forward

Symbol	Name	Function Class
Swap70	SWA-70 protein	within coordinates
Tssr68496	transcription start site region 68496	583 bp downstream
Tssr68497	transcription start site region 68497	443 bp downstream