rs32119970 SNP Detail

Summary

• ID
  rs32119970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37136569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCGCTTCC AAAGAGGCCT
  AATGGGTCAT TAAGATGGCC CACAGACCAC CTACAAACCT CCCACGAAGC CTGGCTTCAC
  TGTGGGTTAG GCACAAGCAG CGGCTTTGAA AAGAAAACAT TGAAAAGATT TTCCTTGTTC
  ATCAGGACAG AACTGGGGTT GTTTGTTTGT TTTGTTTTCT TGGTTTTGGT TTTTCGAGAC
  R
  GGGTTTCTCT GTGTAGCCCT GGCTGTCCTG GAACTCACTC TGTAGACCAG GCTGGCCTCG
  AACTCAAAAA TCAGCCTGCC TCTGCCTCCC GAGTGCTGGG ATTAAAGGCG TGCGCCACCA
  CTGCCCAGCA GAATTGTTAT TTATTATGTC ATTTATTATT GATGTAGTTT GCTAGACAGG
  GGAAGGGAGG GCCAGAGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss39364652	mCV23210962	ABI	CRAMUS_MOUSE	f	SNP	G		A
ss147623230	ENSMUSSNP5777694	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32119970					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37136569 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7042	CpG island 7042	252 bp distal
Gm34820	predicted gene, 34820	within coordinates
Gm41301	predicted gene, 41301	743 bp upstream
Gm41302	predicted gene, 41302	within coordinates
Gm63629	predicted gene, 63629	within coordinates
Rr714	regulatory region 714	within coordinates
Rr501169	regulatory region 501169	1615 bp distal
Rr501170	regulatory region 501170	669 bp distal
Rr501171	regulatory region 501171	450 bp distal
Rr501172	regulatory region 501172	within coordinates
Tssr131093	transcription start site region 131093	411 bp downstream
Tssr134082	transcription start site region 134082	556 bp upstream