rs32119982 SNP Detail

Summary

• ID
  rs32119982
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164146368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATGGGAGGC CATCGCAGAC AGACAGATCT CACAGGCTTT
  GCTTGAATGG AGACACTTCA TACTCGTGTA CTAGAAGACT TGATTTTCCA ATGGGGTAAA
  Y
  AGACTGAACA CAATCCCTGG TAAACTCCCA GAGGCTAATT TTGCAGAAAC TGACAAGCCC
  ATTCTGCCTT TGAGATGGTA ACATGAAGTA CTGAAGTTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45108715	mCV23038130	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
ss145976293	ENSMUSSNP6139349	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32119982					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164146368 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nme7	NME/NM23 family member 7			Intron
				Noncoding-Transcript-Variant
				Splice-Site
Rr422182	regulatory region 422182			1648 bp distal
Rr422183	regulatory region 422183			1882 bp distal
Rr422184	regulatory region 422184			1260 bp distal
Rr422185	regulatory region 422185			876 bp proximal
Rr422186	regulatory region 422186			1943 bp proximal