rs32120411 SNP Detail

Summary

• ID
  rs32120411
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185869831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTCCCCACT GATTCTTAAT CCCAGCAGGA AAAAAAGTGA
  TTCTTATTAA TAATACTAAT ATATTTATAC ACTGTTTATC ATTTGTAAAC CTCTTAGATA
  K
  CTTTTAAAAC ATCGCGAGTA AACTTCGCAT AGTTCTAGGC TATAGTCCTA AAATTGGTTT
  AGGAAAATTA AGCAATTAAT TTAAATCCAT GGTGGCCAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45108914	mCV24949029	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss146452397	ENSMUSSNP5228179	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T
ss320182230	CHEV_1_187961513	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32120411					SNP	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185869831 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	298 bp distal
Rr425454	regulatory region 425454	210 bp proximal
Tssr10623	transcription start site region 10623	305 bp upstream