rs32120476 SNP Detail

Summary

• ID
  rs32120476
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109837661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGTGGTTTC CTCACAGGCC
  TGTGCTGGTA GGAGGAGGTT TCCACACAGG GAATGGTTCT GGGCTTGCAG GAGTTCTTCA
  CCACAGGGTT AGTCCCAGTC ATCTTGCTGG GTCACTACCC ACCCCTGCAG CCTAGGCACA
  GCATGCACAC ATGTCTTTGG AGTTACCATT TCATAGGCAA GGCAGTCTGC CAGCAGAGAG
  R
  AGGAGGCATA CCAAGGAAAG AATCCAGAGT GAGCAGTTTG GGTTCTAATC CCAGTTCCTG
  ACATGCAAGA TTGATTTGGG GCACATCTTC TAATCTTCAT ATTCAACATC TTCATCTGTA
  AAAGTAGCTA CTTTCCTTGC AGTATCTAAA GTGGATGGTG TGAATCTACT CTAAAAGGCC
  CAATCCCCCC CCACCCCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47128357	NES11591227	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	A		A	A	G	A		A
ss322395323	CHEV_7_117381968	CHEVERUD	SCREENING_POP	f	SNP									G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32120476					SNP	G	G	G	G	G	A	G	A	G	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47128357	NES11591227	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109837661 () rs orientation: forward

Symbol	Name	Function Class
Swap70	SWA-70 protein	within coordinates
Tssr68496	transcription start site region 68496	713 bp downstream
Tssr68497	transcription start site region 68497	573 bp downstream