rs32122777 SNP Detail

Summary

• ID
  rs32122777
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45291808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTCTGTTG GCCTCTTCAG GATCCTCCTC TATCTCTTCA
  GCCTCTGATT CAGATCCATG GATCTCAGCC TCAGGCCCAG CTCTGGCTCC AGCTTTGCCC
  M
  CTGTTCCTGC CTCTTTCCTT GTCAGCCCTG GCGTCTTGTC CCCTGAGCCA GCATATTGTC
  CTTGGAGGGC TCCAAAGAAG GTAAGTTTAG ACAGGAGGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46107843	mCV25292095	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss149139916	ENSMUSSNP2444520	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32122777					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45291808 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19076	CpG island 19076	654 bp proximal
Cpgi19077	CpG island 19077	1688 bp proximal
Mamstr	MEF2 activating motif and SAP domain containing transcriptional regulator	within coordinates
Rr400317	regulatory region 400317	1280 bp upstream
Rr646530	regulatory region 646530	1875 bp distal
Tssr66602	transcription start site region 66602	1945 bp downstream
Tssr66603	transcription start site region 66603	597 bp downstream
Tssr66604	transcription start site region 66604	1569 bp upstream