rs32122894 SNP Detail

Summary

• ID
  rs32122894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12569719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTG CCTGCTTGTA GAGGACAGAG
  R
  GTACCTTTCC GGATCGCTAC CCTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46107380	mCV23046841	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss148340684	ENSMUSSNP4665781	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G
ss322106503	CHEV_7_13421141	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32122894					SNP	G	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12569719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	373 bp distal
Rr642383	regulatory region 642383	1021 bp distal
Rr642384	regulatory region 642384	846 bp distal
Rr642385	regulatory region 642385	299 bp distal
Rr642386	regulatory region 642386	within coordinates
Tssr64479	transcription start site region 64479	981 bp downstream
Tssr64480	transcription start site region 64480	740 bp downstream
Tssr64481	transcription start site region 64481	531 bp downstream
Tssr64482	transcription start site region 64482	158 bp upstream
Zfp110	zinc finger protein 110	within coordinates