rs32123815 SNP Detail

Summary

• ID
  rs32123815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189775636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATGGACAT GGAAGTCTAA CTCAGGGCTG GCTGGCACAA
  ACGCTTTTGC TTTTCGCCAC AAGGTACCCT GAGCAAACAG AAAAACAGAA CAAGAAAAAC
  Y
  CTCGTCCTAG GCATGTTCCA GGCCTCCTGA GAAGACTGCC CGGGAGCTCT TTCAACAGCC
  AACATGTCAG AGTCGTGGCT GTGACATTGT CAGGCGATT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45108751	mCV22788326	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C	T
ss146494478	ENSMUSSNP3811116	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32123815					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189775636 () rs orientation: forward

Symbol	Name	Function Class
Gm39736	predicted gene, 39736	within coordinates
Rr425901	regulatory region 425901	1922 bp distal
Rr425902	regulatory region 425902	938 bp distal
Rr425903	regulatory region 425903	700 bp distal