rs32123817 SNP Detail

Summary

• ID
  rs32123817
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188920847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACACACT ATTCTAACAT
  GAGAAGTTCA AAGGCCAAGC TAGGAACCTA TTTTTCAATG CAATATTCAG TGTGAGAAAT
  TTCAGCAAAG ACTATCTCTA GGACCAGTTT TTGATTAAGG AAAACAATAT TTTCAGAAGG
  GTCCATAGTT CAATTTAGTT TAATGTTAAC ATTGTCTAAA TGTTAACATT TTAGGCATAA
  Y
  ATATGTGTTC ATATGTAATA ATGTTTCAAT CCCTTAAATA GAATATATAT ATATATATAT
  ATATATACAT AATAATGTCT CAATCCCTTA AATAGAATAT ATATACATAT ATTATTCTGA
  TATATATATA TATATATATA CATATTATCA TATATGAGAT CAGAGCCTTT TCCAGTCCAT
  AAGGGGTCAA GAGTAGTCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45108753	mCV23588909	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss146484425	ENSMUSSNP6615511	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32123817					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188920847 () rs orientation: forward

Symbol	Name	Function Class
Rr1101	regulatory region 1101	49 bp downstream
Rr425768	regulatory region 425768	892 bp distal
Rr425769	regulatory region 425769	320 bp distal