rs32124331 SNP Detail

Summary

• ID
  rs32124331
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:115633236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGC GCTGAGGCCA GTGCCCAGCC
  W
  AACGCGGGGC TCCTGTCCCC TGCCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46108158	mCV22595766	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	A
ss145720555	ENSMUSSNP6721143	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32124331					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:115633236 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19603	CpG island 19603	1477 bp distal
Cpgi19604	CpG island 19604	within coordinates
Rr654129	regulatory region 654129	882 bp distal
Sox6	SRY (sex determining region Y)-box 6	within coordinates
Sox6os	SRY (sex determining region Y)-box 6, opposite strand	1451 bp downstream
Tssr68687	transcription start site region 68687	1992 bp downstream
Tssr74379	transcription start site region 74379	377 bp upstream
Tssr74380	transcription start site region 74380	179 bp upstream
Tssr74381	transcription start site region 74381	106 bp upstream
Tssr74382	transcription start site region 74382	308 bp downstream
Tssr74383	transcription start site region 74383	389 bp downstream
Tssr74384	transcription start site region 74384	462 bp downstream
Tssr74385	transcription start site region 74385	596 bp downstream