rs32124436 SNP Detail

Summary

• ID
  rs32124436
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30736230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAGCCCAGG CGGGTCCCTC TTTTGGACCT CCGCTAACAA
  CCCGAGAGCA GGGGACAGGA TTACACCGAC TTTGTCCCTC CAGCCTAGAG ATACTTATTT
  W
  AAATATCCTG AACATCCTCT CTACTTTTGG ACCAAAAAAT AGCGGGGCAT TCTCTTCTTA
  ATTCTAATTT AATTTAAAAT GTTGGACACA GGGTCTGCC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46107863	mCV22838211	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss148696876	ENSMUSSNP4482067	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss322138596	CHEV_7_31821824	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32124436					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30736230 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	within coordinates
Gm38984	predicted gene, 38984	38 bp upstream
Gm71772	predicted gene, 71772	184 bp upstream
Rr644979	regulatory region 644979	1726 bp distal
Rr644980	regulatory region 644980	1781 bp distal
Rr644981	regulatory region 644981	94 bp proximal
Rr644982	regulatory region 644982	195 bp proximal
Tssr2191	transcription start site region 2191	1320 bp upstream
Tssr65830	transcription start site region 65830	1537 bp downstream
Tssr65831	transcription start site region 65831	183 bp upstream
Tssr65832	transcription start site region 65832	603 bp upstream
Tssr65833	transcription start site region 65833	1000 bp upstream
Tssr65834	transcription start site region 65834	1054 bp upstream
Tssr71891	transcription start site region 71891	306 bp upstream
Tssr71892	transcription start site region 71892	213 bp downstream
Tssr71893	transcription start site region 71893	1055 bp downstream
Tssr71894	transcription start site region 71894	1076 bp downstream
Tssr71895	transcription start site region 71895	1089 bp downstream
Tssr71896	transcription start site region 71896	1119 bp downstream