rs32128767 SNP Detail

Summary

• ID
  rs32128767
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140427790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAC CCCAAAGAAA AACATTTGTC
  R
  GAAGAGAAAG TGACACTGAG ATGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45610704	mCV23725065	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss147709711	ENSMUSSNP1163982	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32128767					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140427790 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15194	CpG island 15194	500 bp distal
Cpgi15195	CpG island 15195	586 bp proximal
Gm69527	predicted gene, 69527	within coordinates
Gm69529	predicted gene, 69529	9 bp downstream
Rcc2	regulator of chromosome condensation 2	62 bp upstream
Rr377298	regulatory region 377298	within coordinates
Rr603517	regulatory region 603517	596 bp distal
Rr603518	regulatory region 603518	within coordinates
Rr603519	regulatory region 603519	73 bp proximal
Rr603520	regulatory region 603520	781 bp proximal
Rr603521	regulatory region 603521	931 bp proximal
Tssr39970	transcription start site region 39970	597 bp downstream
Tssr39971	transcription start site region 39971	524 bp downstream
Tssr39972	transcription start site region 39972	504 bp downstream
Tssr39973	transcription start site region 39973	481 bp downstream
Tssr39974	transcription start site region 39974	133 bp downstream
Tssr39975	transcription start site region 39975	within coordinates
Tssr39976	transcription start site region 39976	8 bp upstream
Tssr39977	transcription start site region 39977	123 bp upstream
Tssr39978	transcription start site region 39978	947 bp upstream
Tssr39979	transcription start site region 39979	968 bp upstream
Tssr39980	transcription start site region 39980	987 bp upstream
Tssr39981	transcription start site region 39981	1031 bp upstream
Tssr39982	transcription start site region 39982	1043 bp upstream
Tssr39983	transcription start site region 39983	1129 bp upstream
Tssr39984	transcription start site region 39984	1354 bp upstream
Tssr39985	transcription start site region 39985	1416 bp upstream
Tssr39986	transcription start site region 39986	1457 bp upstream
Tssr39987	transcription start site region 39987	1602 bp upstream
Tssr39988	transcription start site region 39988	1698 bp upstream
Tssr39989	transcription start site region 39989	1737 bp upstream
Tssr44270	transcription start site region 44270	829 bp upstream
Tssr44271	transcription start site region 44271	796 bp upstream
Tssr44272	transcription start site region 44272	656 bp upstream
Tssr44273	transcription start site region 44273	590 bp downstream
Tssr44274	transcription start site region 44274	1919 bp downstream