rs32130156 SNP Detail

Summary

• ID
  rs32130156
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28164983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGA CACCCTGGGC TTTGTTTGGG
  Y
  GCGTTAACTC ATTCATTCCC TGTGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46109397	mCV22858967	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	T
ss148633023	ENSMUSSNP6234941	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T		C
ss322125398	CHEV_7_29250577	CHEVERUD	SCREENING_POP	f	SNP						C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32130156					SNP	C	C	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28164983 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18706	CpG island 18706	1005 bp proximal
Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	within coordinates
Rr644282	regulatory region 644282	197 bp distal
Rr644283	regulatory region 644283	1426 bp proximal
Rr644284	regulatory region 644284	1543 bp proximal