rs32131039 SNP Detail

Summary

• ID
  rs32131039
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34878175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTGTAAG CTCTGTTCTG
  GGGGTGGACA ATCTGACAGT GAAATGTGTG GTTTTTATAA GTTACAGTTT GAGTATATTG
  GTTATAGGGG ACAACAGCAC ATTCCTTACC GCTTATCATA ATAACATCAG GAAAGAGGAT
  TCGTGGCATC CAAGCAAGTG GATACAATGT GTTCTGCTAC ATAGAATGAT TTATGGCATC
  Y
  GGGGCTTAGC TGTATTTATT TATTTGTCAA TACAGGAAGT TAGAGGTTAT CTCCTAAGAA
  ACAGTCAGGA ATGTCACCTG GGGCTAGAGG AAGCTCTGTC CTACACACTC ACACAGTCAG
  CTATCACCCT ATCAGCATTT AAAATAAACC CTACACTGGA CCCAAAGTGA ATAAAGGCTC
  TTGCTGCCAG GCCTGATGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39366170	mCV23392491	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss147562980	ENSMUSSNP2407812	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32131039					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34878175 () rs orientation: forward

Symbol	Name	Function Class
Rr500781	regulatory region 500781	1270 bp proximal
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	1801 bp upstream
Tssr133983	transcription start site region 133983	1688 bp upstream
Tssr133984	transcription start site region 133984	793 bp downstream