rs32133418 SNP Detail

Summary

• ID
  rs32133418
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:113365625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TCTCCCGTGT CCCTGAGGCT TAGCCGGGGT CCGGCGCTGC TGGCCCTCGC
  R
  CTGCCCCTGG CCGCAGCGCT AGCTTTCTCA GATGAGACCC TGGACAAAGT           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46109246	mCV24770940	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145682779	ENSMUSSNP3400672	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss322424334	CHEV_7_120909902	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32133418					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:113365625 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19594	CpG island 19594	within coordinates
Rr653859	regulatory region 653859	204 bp distal
Rr653860	regulatory region 653860	1301 bp proximal
Spon1	spondin 1, (f-spondin) extracellular matrix protein	within coordinates
Tssr68625	transcription start site region 68625	593 bp downstream
Tssr68626	transcription start site region 68626	541 bp downstream
Tssr68627	transcription start site region 68627	477 bp downstream
Tssr68628	transcription start site region 68628	349 bp downstream
Tssr68629	transcription start site region 68629	325 bp downstream
Tssr68630	transcription start site region 68630	290 bp downstream
Tssr68631	transcription start site region 68631	189 bp downstream
Tssr68632	transcription start site region 68632	133 bp downstream