rs32135223 SNP Detail

Summary

• ID
  rs32135223
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109905741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAACTTGC TGCCAGCCCT
  TCTTGATGGC AGCTGCTCCA AGCAGGCTAC TGGGTCGACT GTGTCATCTA GGATAGGAGC
  AGCAGGAACA GTGCTTTGTG GAAGTGTACA GGGTTCAATC AGTACACAGG GCTGCACACA
  GATGCCACAT GGCTGCTATC CTGAGCCACA GGAGCGTCTG TATCTGTAAC AAGCCTCTTT
  Y
  AATCACGTCT GCACTCACGC AGGGTAGAAC CGGTAGGTAG CTTTGGGATG GGGGCCCCTC
  ATCAAAAAGG TTTGACAGGA AAAGAGGGGG TGGGAATTTT CAGTCCTTCC TCTTGTCTCA
  GGGTGAGGTG GTCATGTGTT GAAACCCCTC AACAGTCAGA TTAGGGGAGG TCAGGGTTGC
  CTGGCTGTCA GGCTGCTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss47129515	NES11586507	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32135223					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47129515	NES11586507	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109905741 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	740 bp distal
Rr159223	regulatory region 159223	341 bp distal
Rr159224	regulatory region 159224	260 bp proximal
Sbf2	SET binding factor 2	1479 bp downstream