rs32136119 SNP Detail

Summary

• ID
  rs32136119
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109906976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGCCTGT GAGCCCCCAG
  CTGAAGCTCC TGCCTGACAT AAGGACCAGC ATTCCTTAAA GCTGTGTGAG GTAAACTCCA
  AAGATGATGG ACAATATCCC CTGCAGAAAC CAACTCCTCA ACCCAAAAAA GTCTATGACC
  CAGGAAGACT TCAGTGTCTT CTGCCTGAAA TCAATATAAT CTGCCACTCG CCAGGGGAAA
  Y
  GGTGGCCCAG GAGAGGCAGG AGCTTGGCAC CTGGAACAGC TTACTAGGGG TGCAGAGAGG
  ACGCCTGAGA CTTTCCCCAG ATGCCGCAGG GCTGGATCAG AACCCAGAAG CTCACGGCCA
  CACCCCAGCA TCTCTGTGCT TCCGAGGCCC AAATGGTCAC AGTTTAGATG GAGCCTTGGC
  CCCATGCCGC TCCTGAGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47129521	NES11586387	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32136119					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47129521	NES11586387	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109906976 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	1975 bp distal
Rr159223	regulatory region 159223	1576 bp distal
Rr159224	regulatory region 159224	776 bp distal
Sbf2	SET binding factor 2	244 bp downstream