rs32136796 SNP Detail

Summary

• ID
  rs32136796
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:115050105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACT ACTATCTGGC CCATGCAGCA
  K
  GCCAAATCAT CTTGTGTTCC CGCCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149118842	ENSMUSSNP5906704	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss321653765	CHEV_5_115362053	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32136796					SNP	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:115050105 () rs orientation: forward

Symbol	Name	Function Class
Oasl2	2'-5' oligoadenylate synthetase-like 2	within coordinates
Tssr48139	transcription start site region 48139	1022 bp downstream
Tssr48140	transcription start site region 48140	988 bp downstream
Tssr48141	transcription start site region 48141	771 bp downstream
Tssr48142	transcription start site region 48142	681 bp downstream
Tssr48143	transcription start site region 48143	638 bp downstream
Tssr48144	transcription start site region 48144	598 bp downstream
Tssr48145	transcription start site region 48145	531 bp downstream
Tssr48146	transcription start site region 48146	465 bp downstream
Tssr48147	transcription start site region 48147	450 bp downstream
Tssr48148	transcription start site region 48148	384 bp downstream
Tssr48149	transcription start site region 48149	364 bp downstream
Tssr48150	transcription start site region 48150	351 bp downstream
Tssr48151	transcription start site region 48151	309 bp downstream
Tssr48152	transcription start site region 48152	251 bp downstream
Tssr48153	transcription start site region 48153	161 bp downstream
Tssr48154	transcription start site region 48154	145 bp downstream
Tssr52739	transcription start site region 52739	1041 bp upstream