rs32136798 SNP Detail

Summary

• ID
  rs32136798
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:115050179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCGT GGACGTAAAT CTATCTCCCT
  Y
  GTCTAATCAG ACTCGATTGT TTTTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149118846	ENSMUSSNP6052165	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss321653767	CHEV_5_115362127	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32136798					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:115050179 () rs orientation: forward

Symbol	Name	Function Class
Oasl2	2'-5' oligoadenylate synthetase-like 2	within coordinates
Rr618060	regulatory region 618060	1624 bp distal
Tssr48139	transcription start site region 48139	1096 bp downstream
Tssr48140	transcription start site region 48140	1062 bp downstream
Tssr48141	transcription start site region 48141	845 bp downstream
Tssr48142	transcription start site region 48142	755 bp downstream
Tssr48143	transcription start site region 48143	712 bp downstream
Tssr48144	transcription start site region 48144	672 bp downstream
Tssr48145	transcription start site region 48145	605 bp downstream
Tssr48146	transcription start site region 48146	539 bp downstream
Tssr48147	transcription start site region 48147	524 bp downstream
Tssr48148	transcription start site region 48148	458 bp downstream
Tssr48149	transcription start site region 48149	438 bp downstream
Tssr48150	transcription start site region 48150	425 bp downstream
Tssr48151	transcription start site region 48151	383 bp downstream
Tssr48152	transcription start site region 48152	325 bp downstream
Tssr48153	transcription start site region 48153	235 bp downstream
Tssr48154	transcription start site region 48154	219 bp downstream
Tssr52739	transcription start site region 52739	1115 bp upstream