rs32137890 SNP Detail

Summary

• ID
  rs32137890
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139533379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTTCAAAG CATCCTTGCT TTCATCCTTA ATTCCATATT
  GAGGTTTTTA AATAACATAT GGAATCAGTA AAAGTTCTGA GAATGATGAG CCCGACTTGT
  M
  GGAGGGAGAT GGGAGGAATC ATGGAGCACT TACTAAGGTT GATGCTTTGC AAAACAGATG
  TTATGTTTCT TGCTTCTTCT AAATAGGGGT TTCCAAATG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48129641	NES11842012	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	C	A	A	C	A		A	C	A		C
ss133918642	ENSMUSSNP4882175	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					A
ss322020287	CHEV_6_139504902	CHEVERUD	SCREENING_POP	f	SNP										A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32137890					SNP	C	A	A	A	C	A	A	C	A	A	A	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48129641	NES11842012	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139533379 () rs orientation: forward

Symbol	Name	Function Class
4930404I20Rik	RIKEN cDNA 4930404I20 gene	within coordinates
Gm67453	predicted gene, 67453	1335 bp upstream