rs32137946 SNP Detail

Summary

• ID
  rs32137946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:86289173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGG TATGCACAAA ACCAAGATCA
  R
  TAACTGTCCA GTTATTATAC AAATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45110680	mCV24369620	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss144876578	ENSMUSSNP1309945	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
ss319828142	CHEV_1_88258026	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32137946					SNP	A	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:86289173 () rs orientation: forward

Symbol	Name	Function Class
C130036L24Rik	RIKEN cDNA C130036L24 gene	within coordinates
Cpgi503	CpG island 503	1116 bp distal
Gm71192	predicted gene, 71192	1486 bp upstream
Rr23376	regulatory region 23376	1828 bp proximal
Rr29752	regulatory region 29752	172 bp distal
Rr396146	regulatory region 396146	1835 bp downstream
Tssr7749	transcription start site region 7749	1861 bp downstream
Tssr7750	transcription start site region 7750	1759 bp downstream
Tssr12791	transcription start site region 12791	1965 bp upstream
Tssr12792	transcription start site region 12792	1485 bp upstream