rs32139431 SNP Detail

Summary

• ID
  rs32139431
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153063295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGC CCAGCTACTG CTAACACTTC
  R
  GTTCCTTGAG AGCAGGCATC TATAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45111405	mCV24779913	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32139431					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153063295 () rs orientation: forward

Symbol	Name	Function Class
Cpgi864	CpG island 864	1082 bp distal
Lamc2	laminin, gamma 2	1102 bp upstream
Tssr14250	transcription start site region 14250	1493 bp upstream
Tssr14251	transcription start site region 14251	1457 bp upstream
Tssr14252	transcription start site region 14252	1427 bp upstream
Tssr14253	transcription start site region 14253	1413 bp upstream
Tssr14254	transcription start site region 14254	1394 bp upstream