rs32140199 SNP Detail

Summary

• ID
  rs32140199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73604416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCCAGGC AGGGCTGGGA
  GCCGGGTGTG TGGCTGGAGT GGGGTTGAGA CATTTCATCT AGGAGCCATC TGACCGTCTG
  TCCACCCCTC CCCCGCCCAG AGGAGGCCCA ATAGTGCTGA TCACAGGACT CAGGCAAAGC
  CACTTGGGGC TCCATCCCAG GGTGGTCTGT GTGATGTGTG TGGGATCCTG GGAACAGGAG
  R
  GGACACACGT TGCACGGACC ACCAGGTGGA GGCTGCATGG GGGAGGAGTG ATCTCAGGGC
  AGGAAGCGGA AGAGGTGCAG GAAGCAGATG TGGCCTTGGG AAGGGAGGGG CCCCTGGGAG
  TGGGGGCAGA GGAGAGAGAA GTAGAGAGAT CACAGAGCAC AAATAGTACC AGTGGTCTGG
  GCCCTTCGGA CCCCTCTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss39367458	mCV23352498	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148118207	ENSMUSSNP4991542	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32140199					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73604416 () rs orientation: forward

Symbol	Name	Function Class
Ptp4a3	protein tyrosine phosphatase 4a3	within coordinates
Rr311850	regulatory region 311850	within coordinates
Rr369950	regulatory region 369950	within coordinates