rs32140943 SNP Detail

Summary

• ID
  rs32140943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:87264366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAACTGTATA ACCTTTGAAT TTACAATCCT TTCTCTGCTT CCTGACCTGA GTATTGGAAT
  TATAGGTGTG TACTACCATA CTTGGCTTTA AACTTATTTT GGGAGACAGG TCTCATGTAG
  GCTGGCTTCA AATTTGTTAT GCAGCTGAGA CTGGCTTTGA ACTTCTAGTC CTCCTGACTC
  TGTTCCAAAT GCTGTGGTTA CAGATATGTG CCATTAGAGA CTTCATAGTT ACTGATCCCT
  TCCTGTGTTT TTTTTTTTTT TTTTTTAAGA TAAGCTCGCA TGGCCTTGAA CTACTATGTA
  R
  AATTGCCCAG TGGCCTGGTG CTCATGAGTG AGATTCTTGC CTTTGCTCCA TAACTGCTGG
  AGTTAAGAAG CATGTGCCCA GTTTATGGCA ATTTTTCTTA GTGGAACAAT TTTTTCTAAC
  GTTATATGTT TGTTGACTTA CAGTTTTCAA TTAAAATATT TTATAGCTAG GTGTAGTGAT
  ACTTTGCCTT AAATCCCAGC ACTTGGGAGG CAGAAGCTGT CAGATCTCAG AGATTGAGGC
  CAACCTGGTC TACAAAGTGA GTTCTAGGAC AGCTAGAGCT GCACAATGAG ACACTATCGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45112196	mCV24741724	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32140943					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:87264366 () rs orientation: forward

Symbol	Name	Function Class
Gigyf2	GRB10 interacting GYF protein 2	within coordinates
Rr17986	regulatory region 17986	1435 bp proximal
Rr27962	regulatory region 27962	574 bp proximal
Tssr7841	transcription start site region 7841	31 bp downstream