rs32141021 SNP Detail

Summary

• ID
  rs32141021
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30450540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAATCAGAAG GGTGACATCA CAGAACACAA TTGTCATACC TGTCACACCA CACTGCCTGG
  GGCATGGTCA GGAAGGGCTT TCTGACATGC TGGCCATTTG AGCCAGGTGT GGAGTTAGTG
  GAGACAGCTG GGTCACACTC TGGCTTCCAG GCACATGAAA AGTTGCCAGA CAGCCATGGG
  GGGCAGGGTG GAGGGCTGAG GAGCTCGGAC AAAGGCCATG TAACTGGAGC AGAGAGAGAG
  GTGGGAGAGG GAACTCCAAG GACAAAACCA GGCAACTCCT TCAGCTCCTT GGGGTGGGGG
  Y
  GGGGGGGTCC TCTTCTCCCT GTCTGCTTTC CACTCTTCCA GAGTTATCCT GTAGAGCAAG
  CCTTCTAAGA GGACTGACAG GGTGGTTAGG GATGGAGGGT GCCTGAAGGT GGGTTCAAAA
  GGAAGGAGGA TGGCCAGTGG GAGAGAGAGG AAAACAGGAG GGGGCTGGGC AGGGCAGAAC
  CCTACTGGGG TGGAGGGCCT GAGCAGGTTA AAGAGCAGAG GCAAGGATCT TGTCCATGAA
  TCATCCTGTC TTCCTCCTCC TCCTCCTCCT CCTCTTAATT GCTCAATCCC AAATATCTCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46110293	mCV25317038	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32141021					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30450540 () rs orientation: forward

Symbol	Name	Function Class
Sbsn	suprabasin	356 bp upstream
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	411 bp upstream
Tssr71856	transcription start site region 71856	1042 bp downstream