rs32141197 SNP Detail

Summary

• ID
  rs32141197
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139535577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGCAATA TTGAATACAA
  TATATCAGTA AATAGGAACC TAGAAAGTGA TTATTGTCAT CTGTCAATTT AATATGCTAA
  CCTGTCTCCT CATCTTAAAA ATTTCCAGGT TTTGTCAAAC ATAGTCTCTT AATTGGAATT
  TCTGTTAAAA GTTCTGTTTG GAATTTCTAA TTTACTTTGA GTACCTGTTT GATATTAGAG
  R
  CCTTTTCTGT TTTTCTCTCC ATCTGGTGAT GTTATGACAT GAATAATGCA AAGAAGCGGG
  GCAGAGAAAG CAGCTCTGAT GGCAACCGCT CTCTAGAACC AGGGCAGTCA CTCAGCGTCC
  CTCACACGAG AAAGTCTACC TCTACTAATG CAGAAACCAT AAACTTACCT TCCCAATTAT
  CTTCCAGGAA AGCTCCAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48129681	NES11841787	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32141197					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48129681	NES11841787	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139535577 () rs orientation: forward

Symbol	Name	Function Class
4930404I20Rik	RIKEN cDNA 4930404I20 gene	459 bp upstream
Gm67453	predicted gene, 67453	within coordinates