rs32141440 SNP Detail

Summary

• ID
  rs32141440
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101313458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA CTGGGTTCAA GGGAGAGGTG
  K
  GTGGGTGGGT CATGACTCCT TTGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46109645	mCV24196639	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	T
ss145557409	ENSMUSSNP6821665	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32141440					SNP	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101313458 () rs orientation: forward

Symbol	Name	Function Class
Clpb	ClpB caseinolytic peptidase B	within coordinates
Cpgi19507	CpG island 19507	within coordinates
Rr400489	regulatory region 400489	453 bp downstream
Rr652443	regulatory region 652443	468 bp distal
Rr652444	regulatory region 652444	272 bp distal
Rr652445	regulatory region 652445	218 bp distal
Tssr68257	transcription start site region 68257	638 bp downstream
Tssr68258	transcription start site region 68258	634 bp downstream
Tssr68259	transcription start site region 68259	572 bp downstream
Tssr68260	transcription start site region 68260	517 bp downstream
Tssr68261	transcription start site region 68261	461 bp downstream