rs32141600 SNP Detail

Summary

• ID
  rs32141600
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98154500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACTAGGTC CTTAGCTCTA GACCTTGCCC TTGACCTAGC
  CTTTGACCTG GCCCATGACT TGGCGCTAGA CCTGGTGCTT GACTTGGCGC TTGACTTGGC
  R
  CTTGACCTGG CGCTTGATCT GGCACTTGAC TGGGCCCTTG ACCGGGCTCT TGATCTGGCC
  CTTGATGTGG CCCTTGAAGT GGCCCTTGAA GAGGCTCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39367580	mCV23433335	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148453787	ENSMUSSNP7202672	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss325078971	CHEV_15_98087050	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32141600					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98154500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7649	CpG island 7649	144 bp proximal
Gm62000	predicted gene, 62000	1223 bp upstream
H1f7	H1.7 linker histone	within coordinates
Rr311340	regulatory region 311340	within coordinates
Rr391174	regulatory region 391174	845 bp upstream
Tssr136230	transcription start site region 136230	677 bp downstream
Tssr136231	transcription start site region 136231	790 bp downstream