rs32143088 SNP Detail

Summary

• ID
  rs32143088
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191178506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGCACCTGG CGGCCGGATA AACAAGCACC CATCGGTCTC CTGACTGCAG ATGCAACGTG
  ACCAGCTGCC TTCCTCACGG TGGTGGACTG CCGGTTCAAG GCATGAACCA AAACAAACAC
  TTCTCTCCTC AAGCGGCTCT TGTTGGTGTT TGGTCACAGC AAGGGGAAAG GTGACTAACA
  CAGTCTCCTT CAGTGAAATG CACTCCACAG CAGGAAACCA CACTCCTCAG ATCAAAGGAG
  GGGGTCCCTC TCTGAGACTT CTTCCCTTTC TGCCTATCCT TTTCCATCCA CATTTAAATT
  W
  AAAAAAAAAA ATTTTTTTTG ATGCAGGGTC TTATGTAACC TGGGCTAAGG ACAACCTTTC
  TATATAGCAC AGGCTGACCT TGAACTCCTG ACCTTCCTGT CTGTAGCTCC CAGTTCCTGA
  GATTACAAGT GTGTGCTGCC ACAGCTGCCC GCCCCCCCTC TATCCTCTTT TACTGACCAC
  CTTCGTGTTA GGTTCAAGAG CAGAGAATAC AGAACAACAA CAACAAAAAC TAGAGAGCGT
  GAAGCACTGG GTAGTAGAGC TAATGAATAA CCAGCAAGTT CCATAACCCG CCTTGTGCAC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45111079	mCV23930581	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32143088					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191178506 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	within coordinates
Tssr15793	transcription start site region 15793	491 bp upstream