rs32145465 SNP Detail

Summary

• ID
  rs32145465
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28525128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTC TCTGCAGACT AGGCTGGCCT
  S
  GATCTGAGAT CGGACTGCTT CTGCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46109884	mCV24572462	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
ss148637530	ENSMUSSNP1030795	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C		C
ss322126532	CHEV_7_29610722	CHEVERUD	SCREENING_POP	f	SNP				G		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32145465					SNP	G	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28525128 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18723	CpG island 18723	210 bp distal
Ech1	enoyl coenzyme A hydratase 1, peroxisomal	within coordinates
Rr155798	regulatory region 155798	1273 bp proximal
Rr167384	regulatory region 167384	within coordinates
Rr380577	regulatory region 380577	within coordinates
Tssr65547	transcription start site region 65547	488 bp downstream
Tssr65548	transcription start site region 65548	418 bp downstream
Tssr65549	transcription start site region 65549	389 bp downstream
Tssr65550	transcription start site region 65550	340 bp downstream
Tssr65551	transcription start site region 65551	1819 bp upstream
Tssr65552	transcription start site region 65552	1928 bp upstream