rs32146697 SNP Detail

Summary

• ID
  rs32146697
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134068537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTAGCCTG GGCTAGACGT
  GGTCATTTCT AGCCTGGGCT AACCATGGCC GTAGTGATAC ACATGGCCTT TCCTTCTGTA
  AGACCCCCGA AACTGGGGAG ACCTCCGCTC AAGTCCCGGG ATGAGCTGGC ACCCCAATAA
  CTCGAGAGAA AACCACACCT GATGCAAAAC TGCAAGAGGC TTTGTTGTCA GCTAGCTGAG
  R
  ACGAACTCCT TTTGCAGCTG TGCAGGGCAG GGGAGTTCGA CCCCAAGGGG TAACAGTAGG
  GGGCTTTTAA AGGAAAAAGT GAGAAGTTGG GAGGAGTTTG GCTACAGCTC TTCTCTGGCA
  GGTGTCCTTG GTAAAATTAC AAGGCATGAG GAGTGGGGAG TGAGTTGTAG CTCTTCTTTG
  TGGAGTTTAT CTCCGTGTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45613088	mCV22575507	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss321346942	CHEV_4_133897141	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32146697					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134068537 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15035	CpG island 15035	1696 bp proximal
Rr601645	regulatory region 601645	1465 bp proximal
Slc30a2	solute carrier family 30 (zinc transporter), member 2	1955 bp upstream
Tssr39548	transcription start site region 39548	1917 bp upstream
Tssr39549	transcription start site region 39549	1972 bp upstream