rs32146718 SNP Detail

Summary

• ID
  rs32146718
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149414013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGCTCAGG GGAAGCTGCC
  CAGACCCACT TGTCACTAAA CACTTCCGCT GCCACAGCCC CAGGTAGCGA CAGGCGAAGG
  GTGCGCTTTA CTACACAAGC CATCGTAAAC TCGTCCCTCA AGCTTTGACT GTTGTCACTT
  AAATATATGT ACAGGAATCC TCTTCTCGTC ATCCCCTCAG ATCTCCACTG TTTGGTCACA
  Y
  GGGTGGGCTC TCAGGATCTG GCCACATCTG GTTACAGGCT GGAGCTGCAG CCTCGAGGCA
  GATGCTGCTG CGGCCTGGCT GGCTGGCGTG GCGGCTTCCA GCGGAGGAGC GATGGGGCCT
  CAGTGGTCAC TGCTCTGTTT CTCTCTCATC CAGGCCTGAA TCTGCTCCTT TAGCTCTGGC
  ACTGAGGGAG AAAGCACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45612891	mCV24954233	ABI	CRAMUS_MOUSE	f	SNP	T	C					C
ss46702608	NES10938224	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T	C		C	C	C	C	C	C	C	C	T
ss148031303	ENSMUSSNP5519323	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32146718					SNP	T	C	C	C	T	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46702608	NES10938224	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149414013 () rs orientation: forward

Symbol	Name	Function Class
Rr604891	regulatory region 604891	1920 bp distal
Rr604892	regulatory region 604892	1125 bp proximal
Ube4b	ubiquitination factor E4B	within coordinates