rs32147337 SNP Detail

Summary

• ID
  rs32147337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135253578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCA TGGGCAGGGT GGTTATTTCT
  Y
  TTAAAGCTTT GATAATGATG AATAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45112600	mCV23633437	ABI	CRAMUS_MOUSE	f	SNP	C	C				T		C
ss51380624	NES14469655	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C		T	C	C	C			C	C	T		C
ss145530790	ENSMUSSNP2212788	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C						C				T
ss319989141	CHEV_1_137222417	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32147337					SNP	C	C	C	C	C	T	T	C	C	C	C	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51380624	NES14469655	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135253578 () rs orientation: forward

Symbol	Name	Function Class
Gm41956	predicted gene, 41956	1174 bp upstream
Lmod1	leiomodin 1 (smooth muscle)	within coordinates
Rr12584	regulatory region 12584	978 bp distal
Rr28593	regulatory region 28593	within coordinates
Tssr8958	transcription start site region 8958	1020 bp downstream
Tssr8959	transcription start site region 8959	984 bp downstream