rs32154267 SNP Detail

Summary

• ID
  rs32154267
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:51622828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAAATTCA GAAATGGTCT
  GAGTTTAATG ATATTTATTA ATATGAATTA TTATTTCCTA TTGGTTTTCC CCTGCAGAAG
  AGTAAAGTAA TTTTGTTCTT TCAAACTTTT TGGTCTAGTG ACACACTGTC AGAGAACAAC
  ACAGATTTAT TTAGTAATTG AAATTTTTAA AGTTTTTAAA ATTATGTGTA CGTGTATGTG
  Y
  GTATATCTGT GTGCCACATA TATGCAGGTG CCTGAAGAGA CCAGAAAAGG ACATTAGAGA
  CCCATGAAGC TGGAGATTCA GACAGCTGTG GATCACCAGC TGTGGTCCAG GGAGCTCTAC
  TCTTCTCTGT CCTCAGGAAG AATATGAGTG CTCTTGACTG CTGAGCCATC TCTCCAGCCA
  CAGCTAGGTG TATTTCTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45113038	mCV23216012	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss149111604	ENSMUSSNP2472365	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32154267					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:51622828 () rs orientation: forward

Symbol	Name	Function Class
Gm17767	predicted gene, 17767	within coordinates
Gm70189	predicted gene, 70189	1719 bp upstream
Rr366895	regulatory region 366895	1262 bp upstream
Tssr6632	transcription start site region 6632	1683 bp upstream
Tssr6633	transcription start site region 6633	1744 bp upstream
Tssr11575	transcription start site region 11575	1302 bp downstream
Tssr11576	transcription start site region 11576	1593 bp downstream