rs32157560 SNP Detail

Summary

• ID
  rs32157560
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110677050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTC ATTTGCAATT CCTAAAGCAC
  R
  TGAGACAATG GTTTCCTACC AGTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47132810	NES11601297	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G		G	G	G	A		G
ss322401256	CHEV_7_118221357	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32157560					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47132810	NES11601297	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110677050 () rs orientation: forward

Symbol	Name	Function Class
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	within coordinates
Gm23262	predicted gene, 23262	1616 bp upstream
Tssr74287	transcription start site region 74287	1667 bp upstream
Tssr74288	transcription start site region 74288	1649 bp upstream
Tssr74289	transcription start site region 74289	1612 bp upstream
Tssr74290	transcription start site region 74290	1445 bp upstream
Tssr74291	transcription start site region 74291	278 bp downstream
Tssr74292	transcription start site region 74292	661 bp downstream
Tssr74293	transcription start site region 74293	713 bp downstream
Tssr74294	transcription start site region 74294	1473 bp downstream