rs32158345 SNP Detail

Summary

• ID
  rs32158345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129228475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA GACAAATCAA GTTAGCGAAC
  R
  TAAACGGAAA GGGCACAAAC CTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45614201	mCV22717101	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147438509	ENSMUSSNP3815115	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss321312035	CHEV_4_129011926	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32158345					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129228475 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	within coordinates
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	677 bp upstream
Rr367702	regulatory region 367702	1125 bp upstream
Rr600200	regulatory region 600200	639 bp proximal
Rr600201	regulatory region 600201	678 bp proximal
Tssr39141	transcription start site region 39141	911 bp upstream
Tssr39142	transcription start site region 39142	1280 bp upstream
Tssr39143	transcription start site region 39143	1334 bp upstream
Tssr43492	transcription start site region 43492	561 bp downstream
Tssr43493	transcription start site region 43493	615 bp downstream
Tssr43494	transcription start site region 43494	642 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	850 bp upstream