rs32158600 SNP Detail

Summary

• ID
  rs32158600
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125670341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tatgtgcat gcatgtgcat ttatatatat
  gtctatacat gtatatgcat gaatgtgtgt atctgtaccc atgcatatat gtctatgtgt
  agtttttgca tacaaatgtg ttcatgCGat atgtgtacat atttatgtat gtatctatct
  Y
  tgtatgtttg tctgtgtcca tgtatctatg tgtttatatg tatgtatgtc tatgtgtatg
  tgtttatcta tgtaCTGTTC ATGTTCCTTT TATATGTGTA AACTTGTGCC TATGTATATA
  GAATGCATTA TATGAGTACT ATCAGGATAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45113637	mCV23282460	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145412474	ENSMUSSNP3683804	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss319956341	CHEV_1_127639181	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32158600					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125670341 () rs orientation: forward

Symbol	Name	Function Class
Gpr39	G protein-coupled receptor 39	within coordinates
Rr371980	regulatory region 371980	1566 bp upstream