rs32158695 SNP Detail

Summary

• ID
  rs32158695
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44396148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAAA TCCCTTCTTG
  CTCCTTCTGC TCCATGAAAA GTTTTTGTCC TCCTTAAGCT CATCTTAAAG ACTATTCATG
  CTGTTAACAA ATTTATCTCT TTTATAAACT TACAAACTAC AGGAAACCCA CTCCAATCTA
  CTTCTTATGG ACTAAATAGT CTCCATCCAG GTAAGTACAC CTGCCAAGCA ATAGCCTACG
  Y
  TCTCACTGGC TACCTATTCC AGAGGGTGAG ATTGCTCTCC TGTTCCTGGG ATTGGGACTC
  CTCTTACCCC AAAGACCTAA TTTTTTTTCT CCCAAACGTA CTTAACTTTA TTCTCTACCT
  CCTGTGTGTG TGTGTGTGTG TTTCAGCATC TTGCCAAATC CAAGCGTTTA CTCAAAATCT
  ACACATAAGA CAGCTCCAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46111717	mCV27580296	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss149120941	ENSMUSSNP4852271	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32158695					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44396148 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18992	CpG island 18992	1214 bp distal
Cpgi18993	CpG island 18993	1660 bp proximal
Rr400296	regulatory region 400296	1571 bp upstream
Tssr66420	transcription start site region 66420	1779 bp upstream
Tssr66421	transcription start site region 66421	1878 bp upstream
Tssr66422	transcription start site region 66422	1916 bp upstream
Vrk3	vaccinia related kinase 3	1901 bp upstream
Zfp473	zinc finger protein 473	within coordinates