rs32159128 SNP Detail

Summary

• ID
  rs32159128
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30253100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGGGGCCA GGAGGGGGGT CTAACCCCGG GCCGGGGGTG
  CGGGAATGTC TGTTGATTTT TAACTTAGAG GAGAATGTCA CCCCTCAGTG GGGCCATTGG
  R
  TGTCCCTTGA GTGCGGTATT CTGAGCCCCT CCCCCCCCCC CCCCCCGTTA CTGATCTTCT
  GAGGGGGTGA AGGGTGGGGC AAGTGAGCCG GGAATCTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss46111742	mCV25394903	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss148682325	ENSMUSSNP6551057	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss322135215	CHEV_7_31338694	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32159128					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30253100 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18808	CpG island 18808	1024 bp distal
Cpgi18809	CpG island 18809	141 bp distal
Cpgi18810	CpG island 18810	551 bp proximal
Hspb6	heat shock protein, alpha-crystallin-related, B6	within coordinates
Lin37	lin-37 DREAM MuvB core complex component	1766 bp downstream
Mir9769	microRNA 9769	771 bp downstream
Proser3	proline and serine rich 3	1376 bp upstream
Rr400242	regulatory region 400242	1183 bp downstream
Tssr65779	transcription start site region 65779	1111 bp downstream
Tssr65780	transcription start site region 65780	403 bp downstream
Tssr65781	transcription start site region 65781	366 bp downstream
Tssr65782	transcription start site region 65782	1097 bp upstream
Tssr65783	transcription start site region 65783	1172 bp upstream
Tssr65784	transcription start site region 65784	1196 bp upstream
Tssr65785	transcription start site region 65785	1248 bp upstream
Tssr65786	transcription start site region 65786	1266 bp upstream
Tssr65787	transcription start site region 65787	1360 bp upstream
Tssr71787	transcription start site region 71787	1359 bp upstream
Tssr71788	transcription start site region 71788	1300 bp upstream
Tssr71789	transcription start site region 71789	990 bp downstream
Tssr71790	transcription start site region 71790	1102 bp downstream