rs32159495 SNP Detail

Summary

• ID
  rs32159495
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110678434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAACAAAA TAAAAAAAGG
  AAAACAACTT AACAGCTGTT TCTGGACAGC ATGGTCAACC AAATGGTTCA CCCCCTTGGA
  TCTTGATAGC CATTAAAGGT GTTTATTTTT ATTAGCATCA TTACTCAATC ATATCTACCG
  TGTATGTATA TGTATCATAT ACTTATCCAT ATCTAAGAAT GAATCTCATC ATTTAAAGCA
  R
  TAACTCAGTC AAACTTGGGT CTGTTAAATT CCTCACCCTC TTTTAAGCTA ACATCTTAAA
  CTTACCAGCA GTATGACCCC TTTAAGGATG AGTTTAGACT CTACACCCAC ATTGAGGAGC
  TCAAGGCATA GCTTGTCAAA CTTTTCAGGA GTAAGCTTAT TTAGTATGCT AGGGGGAAAA
  CACAAAATGT GACTTAATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47132825	NES11601181	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32159495					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47132825	NES11601181	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110678434 () rs orientation: forward

Symbol	Name	Function Class
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	within coordinates
Rr166519	regulatory region 166519	566 bp proximal
Rr166520	regulatory region 166520	966 bp proximal
Rr381309	regulatory region 381309	1873 bp upstream
Tssr2372	transcription start site region 2372	1090 bp downstream
Tssr68538	transcription start site region 68538	948 bp upstream
Tssr74291	transcription start site region 74291	1088 bp upstream
Tssr74292	transcription start site region 74292	672 bp upstream
Tssr74293	transcription start site region 74293	659 bp upstream
Tssr74294	transcription start site region 74294	89 bp downstream
Tssr74295	transcription start site region 74295	1062 bp downstream
Tssr74296	transcription start site region 74296	1704 bp downstream