rs32161489 SNP Detail

Summary

• ID
  rs32161489
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:97840470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCT AGATGGTTTT TAAGCCACCA
  Y
  GTAGGTTCTG GGAACTGAAC CCTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss46112710	mCV23541928	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss145464755	ENSMUSSNP6712026	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs32161489					SNP	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:97840470 () rs orientation: forward

Symbol	Name	Function Class
B3gnt6	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6	1152 bp downstream
Rr651557	regulatory region 651557	465 bp distal
Rr651558	regulatory region 651558	572 bp proximal
Rr651559	regulatory region 651559	778 bp proximal