rs32163116 SNP Detail

Summary

• ID
  rs32163116
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100164247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAATAGAA CAGATACAAA
  AATACCTCCT TTTTTTTACT TGGTGCACTC AGAAAATGAA TACAGTTCAA AAACACAGAA
  AAGTGAATGG CATGTTGTGC TGTCCAATAG AAGTCTATGA AGAGAACTGT ATTTATATTC
  AGCTGATGTA AGTCAATAAT AGATTCTATT ACTTCCCCTC TTAGCACAGG CTGGCCTGCA
  R
  TATGTAGCAA GGCCAACTGT CTCAGGGTTT GTACTGTTGA GGTAAAACAC TGTCACCAAA
  AGCAACTGAG GAGAGGCTTT ATTTCAGCTT ATTTTCAGAC TCTCAGGTCA CAATCTATCA
  CTGAGGGAAG TCAGGACAGG AACTAATGCA GACAGCATGG AAGGGCGCTG CTTCCTGGCT
  TGCTCTCTCC ATGTCTTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48132867	NES12125499	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32163116					SNP	A	G	G	G	G	G	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48132867	NES12125499	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100164247 () rs orientation: forward

Symbol	Name	Function Class
Rr391197	regulatory region 391197	1599 bp downstream
Rr391198	regulatory region 391198	1611 bp upstream