rs32163118 SNP Detail

Summary

• ID
  rs32163118
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100166839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTGAGCC ATCTCTCCAG
  CCCCCCAAAC CAGATGTTAT TTGTTTTATG TTTAATTTTT TTCAATTTAC CTTATCTATC
  TATCTATCTA TCTATCTATC TATCTATCTA TTTATTTATT TATTTATTTA AAAACTGCAG
  CCGGTCAGGC AGTAACAAGA GCAGGTTCAG TTACAGTTCC ATTTAGGCTC ACATCTTGTG
  M
  ACATCTTGTG CTGGACAGTT TTCTGTCAAC TTGACACAGG CTACAGTCAT CTGAGAAGAG
  GGAGCCTCAA AGGAGAAAAT GCCTCTATAA CATCAAGCTG TAGGCAAGCC TGCAGGGCAT
  TTTCTTAATC AGTGATTGAT GGGGGAGGGC CCAGCCCACT GAGGGTGGTG ACACTCGTAG
  GCTGGTGATC CTGGGTTCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48132869	NES12125469	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	C	A	C	A	A	A		C	A	C	A		A
ss325082834	CHEV_15_100099389	CHEVERUD	SCREENING_POP	f	SNP											A					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32163118					SNP	C	A	A	A	C	A	C	A	A	A	A	C	A	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48132869	NES12125469	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100166839 () rs orientation: forward

Symbol	Name	Function Class
Gm56733	predicted gene, 56733	1084 bp upstream
Rr391198	regulatory region 391198	within coordinates
Tssr4717	transcription start site region 4717	1130 bp upstream
Tssr133109	transcription start site region 133109	225 bp upstream