rs32165077 SNP Detail

Summary

• ID
  rs32165077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185870729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTAAGGAT TTGTTTTGGA AAACAGTTCA TCCTATCGAG
  TTGGGGGGAG GAGACTTGGT TAAAGCTTGC CTCATGGATT TAGTGAGGCT CTAGATGGTC
  Y
  CTGGGAATAG TGAGGGATTT TATAACTTGA GTTTGTTCAC CAGATCTCGG ACTAGGATCT
  GCCTTGATTT CTTTCTTTTT GCCCAGTTCC ACACTCTCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45113847	mCV24949043	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss146452417	ENSMUSSNP2973656	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss320182236	CHEV_1_187962411	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32165077					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185870729 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	1196 bp distal
Rr425454	regulatory region 425454	167 bp distal
Tssr10623	transcription start site region 10623	561 bp downstream