rs32165855 SNP Detail

Summary

• ID
  rs32165855
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:181338928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGT GTGGTGTTGG CGGGGGTGCA
  Y
  CTCCAGGGCT CTGGGCAAGC ATACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45114452	mCV25243978	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss146396645	ENSMUSSNP3693221	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss320161700	CHEV_1_183441494	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32165855					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181338928 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	Coding-NonSynonymous
Cpgi1136	CpG island 1136	499 bp distal
Rr424762	regulatory region 424762	78 bp proximal
Rr424763	regulatory region 424763	121 bp proximal
Rr424764	regulatory region 424764	1078 bp proximal