rs32169806 SNP Detail

Summary

• ID
  rs32169806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:10982937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTTTTAG TTCTCACAAG
  CATATCTGAG GACAGTACTG TAACATTTAA GATTATGTCA CAATGTAAAA ATGCTCCAAT
  TGAAGATGAG GGTGGGTCAG TGTGATTAGT TTCTTCAGTT GACTCTTAAT TCTGACAACT
  TTCACCAAAA TCACAACAAA CACTGTTAGT ATCACTTGCA AGAGTGTGTT TTTGGTTTGC
  Y
  CCGTAAAAGG AATTATTCCC ATCTTTGATT CGTGCTCTCT TTAAAAACAA AACTGATAGG
  TTAGGGTTAT TTTTCTGCGT GTGAAACGAG CCAGTTCAAG CCAGATTAGA TTATATTAAA
  GGCAGGTTTA TTGGGAAGCT CCTCTCTAGC AGTTCACTGG CCCTAAGGAC CAGGGAAGTG
  TCCATGGGGA AAGGAAGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39371722	mCV24566631	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147066973	ENSMUSSNP6602677	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32169806					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:10982937 () rs orientation: forward

Symbol	Name	Function Class
Amacr	alpha-methylacyl-CoA racemase	within coordinates
Cpgi6946	CpG island 6946	705 bp distal
Gm34315	predicted gene, 34315	1218 bp upstream
Rr311562	regulatory region 311562	within coordinates
Tssr130700	transcription start site region 130700	1086 bp downstream
Tssr130701	transcription start site region 130701	1046 bp downstream