rs32172683 SNP Detail

Summary

• ID
  rs32172683
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30258158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCTTTGA TCTTCTCCAG CACAGAACCC TCAAGGAGTC
  TTCAATCCTG ACTCCAGAAA ATGGGGTCTG TACTCAGTCT GGCGTTTCCA AACCCACCCT
  Y
  GTCCTACCTG CATAGTTGTA GTGAGGCTCC CTCCACTATA TATATTTCTC TCCTCCCACC
  CCCAGTTCTT CACTATATAG CCTTGGGTTG GCATGTTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss46114026	mCV25394674	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss322135264	CHEV_7_31343752	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32172683					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30258158 () rs orientation: forward

Symbol	Name	Function Class
Lin37	lin-37 DREAM MuvB core complex component	within coordinates
Rr400243	regulatory region 400243	862 bp upstream
Tssr71791	transcription start site region 71791	9 bp downstream
Tssr71792	transcription start site region 71792	40 bp downstream
Tssr71793	transcription start site region 71793	765 bp downstream
Tssr71794	transcription start site region 71794	867 bp downstream
Tssr71795	transcription start site region 71795	1095 bp downstream