rs32172756 SNP Detail

Summary

• ID
  rs32172756
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73604134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CGATGATTAG CTCATAGGAC TGCACCACGC TGACGGCTGA CATTTGTCTG CTGCCGTTTG
  ACTGCGAGGA CCTCAGTTTC CTCCCCTGTC AGAAGGTGTG AAGTCTCTGT TTAGGGACTT
  CGGGAGTCCT CAGCTACTGC GAGGCAGGCC CTCCTGCTCC CCCCTACCCC TTTGTCTCCT
  CCTACTAGCT GTAGTTCCCA CGACTGGCCA GTGCAGGAAG CCATCTGGAG GGCTTATTTA
  CCCTCGCTTA GCCTCCCTGG CAGGAAGTCA CCGGAAGGGC CGTCCCCAGG GGCCCCTTCA
  R
  GCCTGTGAGG ACAGCCAGCG GCTTGGGGGT CTGTGCTGTG GAGTCCCCCA GTGGAGCAAG
  GGGGCAGGGA GCTGGGAGAA CAGAGCCAGG CAGGGCTGGG AGCCGGGTGT GTGGCTGGAG
  TGGGGTTGAG ACATTTCATC CAGGAGCCAT CTGACCGTCT GTCCACCCCT CCCCCGCCCA
  GAGGAGGCCC AATAGCGCTG ATCACAGGAC TCAGGCAAAG CCACTTGGGG CTCCACTTGG
  GTGGTCTGTG TGATGTGTGT GGGATCCTGG GAACAGGAGG GGACACACGT TGCACGGACC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39370656	mCV23352521	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32172756					SNP	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73604134 () rs orientation: forward

Symbol	Name	Function Class
Ptp4a3	protein tyrosine phosphatase 4a3	within coordinates
Rr311850	regulatory region 311850	within coordinates
Rr369950	regulatory region 369950	236 bp upstream